Eldar Mamin
eldarmamin@gmail.com
eldar@ubuntu60:~/ffo$ ls -al /home/eldar/ffo/
total 17388
drwxrwxr-x 3 eldar eldar 4096 Jul 27 14:04 .
drwxr-xr-x 36 eldar eldar 4096 Jul 27 14:03 ..
-rw-r--r-- 1 eldar eldar 901 Jul 27 14:03 BENCH01.INP
-rwxr-xr-x 1 eldar eldar 535 Jul 27 14:04 f2
-rw-r--r-- 1 eldar eldar 2457600 Jul 13 2007 fastdiag.ex
-rwxr-xr-x 1 eldar eldar 14781572 Dec 1 2009 firefly
-rw-r--r-- 1 eldar eldar 479232 Jun 4 2009 p4stuff.ex
-rw-r--r-- 1 eldar eldar 36352 Nov 28 2009 pcgp2p.ex
drwxrwxr-x 2 eldar eldar 4096 Jul 27 14:04 tmp
eldar@ubuntu60:~/ffo$ /home/eldar/ffo/f2 BENCH01.INP
/home/eldar/ffo/f2: line 19: /home/eldar/ffo/firefly: No such file or directory
eldar@ubuntu60:~/ffo$
On Fri Jul 27 '12 11:44am, Eldar Mamin wrote
--------------------------------------------
>Pavel,
>here is it
>drwxr-xr-x 5 root root 4096 Jul 26 21:17 .
>drwxr-xr-x 35 eldar eldar 4096 Jul 27 12:30 ..
>-rw-r--r-- 1 root root 927 Dec 7 1996 BENCH01.INP
>drwxr-xr-x 2 root root 4096 Jul 26 20:54 ex
>-rwxr-xr-x 1 root root 556 Jul 26 21:18 f
>-rw-r--r-- 1 eldar eldar 2457600 Jul 13 2007 fastdiag.ex
>-rwxr-xr-x 1 eldar eldar 14781572 Dec 1 2009 firefly
>-rw-r--r-- 1 root root 927 Jul 26 18:29 input
>-rw-r--r-- 1 eldar eldar 479232 Jun 4 2009 p4stuff.ex
>-rw-r--r-- 1 eldar eldar 36352 Nov 28 2009 pcgp2p.ex
>drwxr-xr-x 2 root root 4096 Jul 26 18:28 storefiles
>drwxr-xr-x 2 root root 4096 Jul 26 21:07 tmp
>
>
>
>On Thu Jul 26 '12 8:50pm, Solntsev Pasha wrote
>----------------------------------------------
>>Could you show me output from ?
>>ls -al /home/eldar/FF_openmpi
>>Just copy-paste output.
>>Pavel.
>>
>>
>>
>>
>>On Thu Jul 26 '12 8:30pm, Eldar Mamin wrote
>>-------------------------------------------
>>>Thanks, Pavel,
>>> i did such a script now (named "f")
>>>but it gives me a following error
>>>./f: line 19: /home/eldar/FF_openmpi/firefly: No such file or directory
>>>but of course it IS.
>>>
>>>
>>>On Thu Jul 26 '12 7:56pm, Solntsev Pasha wrote
>>>----------------------------------------------
>>>>Did you try to start FF on one CPU?
>>>>Put all *.ex files and binary file of FF into folder $HOME/FF8.
>>>>I don't like to make a mass in OS with PATH variable, i would suggest to make a script
>>>>#!/bin/bash
>>>># Input format >>>># Input/Output files >>>># Executing line >>>>Pavel. >>>>>OS: 3.2.0-23-generic #36-Ubuntu SMP Tue Apr 10 20:39:51 UTC 2012 x86_64 x86_64 x86_64 GNU/Linux >>>>>i execute firefly by following string from the dir where it lay >>>>>/opt/openmpi1.2.8.exe/bin/mpirun -n 2 /home/eldar/FF_openmpi/firefly -i BENCH01.INP -o asdf.OUT -t /home/eldar/storefiles -ex /home/eldar/ex >>>>>i have exported PATH, here is the output of ECHO >>>>>/opt/openmpi1.2.8.exe/bin:/home/eldar/FF_openmpi:/home/eldar/FF_openmpi/:/opt/openmpi1.2.8.exe/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin >>>>>i did chmod a+x firely, i launch from "root" >>>>>and ALWAYS i get >>>>>-------------------------------------------------------------------------- >>>>>This could mean that your PATH or executable name is wrong, or that you do not >>>>>-------------------------------------------------------------------------- >>>>>This could mean that your PATH or executable name is wrong, or that you do not >>>>>-------------------------------------------------------------------------- >>>>>-the same error.
>>>># Go to dirrectory with your input file
>>>>#
>>>># Basis file should be in the same folder as an input file
>>>>INPUT=$1
>>>>OUTPUT=${INPUT%*.inp}.out
>>>>
>>>>
>>>>WORK_DIR=$PWD # Directory with input file
>>>>TEMP_DIR=$HOME/tmp # scratch folder
>>>>BASIS_FILE=$2 # If you use external basis set
>>>>FF8_HOME=$HOME/FF8 # Directory with FF installed
>>>>$FF8_HOME/firefly -r -p -f -stdext -ex $FF8_HOME -i $WORK_DIR/$INPUT -o $WORK_DIR/$OUTPUT -t $TEMP_DIR -b $WORK_DIR/$BASIS_FILE
>>>>
>>>>
>>>>Try it first.
>>>>
>>>>
>>>>On Thu Jul 26 '12 6:54pm, Eldar Mamin wrote
>>>>-------------------------------------------
>>>>>Hi all
>>>>>i cannot execute firefly
>>>>>my PC: notebook ASUS core-i3
>>>>>Could not execute the executable "/home/eldar/FF_openmpi/firefly": No such file or directory
>>>>>have the necessary permissions. Please ensure that the executable is able to be
>>>>>found and executed.
>>>>>--------------------------------------------------------------------------
>>>>>Could not execute the executable "/home/eldar/FF_openmpi/firefly": No such file or directory
>>>>>have the necessary permissions. Please ensure that the executable is able to be
>>>>>found and executed.
>>>>>
>>>>>
>>>>>i tried without options ./firefly >test.out 2>&1
>>>>>и так
>>>>>./firefly -o test.out
>>>>>
>>>>>
>>>>>
>>>>>
Fri Jul 27 '12 1:23pm
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