Eldar Mamin
eldarmamin@gmail.com
drwxr-xr-x 5 root root 4096 Jul 26 21:17 .
drwxr-xr-x 35 eldar eldar 4096 Jul 27 12:30 ..
-rw-r--r-- 1 root root 927 Dec 7 1996 BENCH01.INP
drwxr-xr-x 2 root root 4096 Jul 26 20:54 ex
-rwxr-xr-x 1 root root 556 Jul 26 21:18 f
-rw-r--r-- 1 eldar eldar 2457600 Jul 13 2007 fastdiag.ex
-rwxr-xr-x 1 eldar eldar 14781572 Dec 1 2009 firefly
-rw-r--r-- 1 root root 927 Jul 26 18:29 input
-rw-r--r-- 1 eldar eldar 479232 Jun 4 2009 p4stuff.ex
-rw-r--r-- 1 eldar eldar 36352 Nov 28 2009 pcgp2p.ex
drwxr-xr-x 2 root root 4096 Jul 26 18:28 storefiles
drwxr-xr-x 2 root root 4096 Jul 26 21:07 tmp
On Thu Jul 26 '12 8:50pm, Solntsev Pasha wrote
----------------------------------------------
>Could you show me output from ?
>ls -al /home/eldar/FF_openmpi
>Just copy-paste output.
>Pavel.
>
>
>
>
>On Thu Jul 26 '12 8:30pm, Eldar Mamin wrote
>-------------------------------------------
>>Thanks, Pavel,
>> i did such a script now (named "f")
>>but it gives me a following error
>>./f: line 19: /home/eldar/FF_openmpi/firefly: No such file or directory
>>but of course it IS.
>>
>>
>>On Thu Jul 26 '12 7:56pm, Solntsev Pasha wrote
>>----------------------------------------------
>>>Did you try to start FF on one CPU?
>>>Put all *.ex files and binary file of FF into folder $HOME/FF8.
>>>I don't like to make a mass in OS with PATH variable, i would suggest to make a script
>>>#!/bin/bash
>>># Input format >>># Input/Output files >>># Executing line >>>Pavel. >>>>OS: 3.2.0-23-generic #36-Ubuntu SMP Tue Apr 10 20:39:51 UTC 2012 x86_64 x86_64 x86_64 GNU/Linux >>>>i execute firefly by following string from the dir where it lay >>>>/opt/openmpi1.2.8.exe/bin/mpirun -n 2 /home/eldar/FF_openmpi/firefly -i BENCH01.INP -o asdf.OUT -t /home/eldar/storefiles -ex /home/eldar/ex >>>>i have exported PATH, here is the output of ECHO >>>>/opt/openmpi1.2.8.exe/bin:/home/eldar/FF_openmpi:/home/eldar/FF_openmpi/:/opt/openmpi1.2.8.exe/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin >>>>i did chmod a+x firely, i launch from "root" >>>>and ALWAYS i get >>>>-------------------------------------------------------------------------- >>>>This could mean that your PATH or executable name is wrong, or that you do not >>>>-------------------------------------------------------------------------- >>>>This could mean that your PATH or executable name is wrong, or that you do not >>>>-------------------------------------------------------------------------- >>>>-the same error.
>>># Go to dirrectory with your input file
>>>#
>>># Basis file should be in the same folder as an input file
>>>INPUT=$1
>>>OUTPUT=${INPUT%*.inp}.out
>>>
>>>
>>>WORK_DIR=$PWD # Directory with input file
>>>TEMP_DIR=$HOME/tmp # scratch folder
>>>BASIS_FILE=$2 # If you use external basis set
>>>FF8_HOME=$HOME/FF8 # Directory with FF installed
>>>$FF8_HOME/firefly -r -p -f -stdext -ex $FF8_HOME -i $WORK_DIR/$INPUT -o $WORK_DIR/$OUTPUT -t $TEMP_DIR -b $WORK_DIR/$BASIS_FILE
>>>
>>>
>>>Try it first.
>>>
>>>
>>>On Thu Jul 26 '12 6:54pm, Eldar Mamin wrote
>>>-------------------------------------------
>>>>Hi all
>>>>i cannot execute firefly
>>>>my PC: notebook ASUS core-i3
>>>>Could not execute the executable "/home/eldar/FF_openmpi/firefly": No such file or directory
>>>>have the necessary permissions. Please ensure that the executable is able to be
>>>>found and executed.
>>>>--------------------------------------------------------------------------
>>>>Could not execute the executable "/home/eldar/FF_openmpi/firefly": No such file or directory
>>>>have the necessary permissions. Please ensure that the executable is able to be
>>>>found and executed.
>>>>
>>>>
>>>>i tried without options ./firefly >test.out 2>&1
>>>>и так
>>>>./firefly -o test.out
>>>>
>>>>
>>>>
>>>>
Fri Jul 27 '12 11:44am
This message read 837 times