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Re: MPICH2 version always runs in a single processor (Linux 64-bit)

Miro Moman
edelmiro.moman@gmail.com


More info:

If I run:

mpiexec -np 16 /home/mirix/Downloads/firefly/firefly_71g_linux_mpich2_p4/firefly -i complex.inp -o output.out /disk/scratch/pcgamess /tmp/pcgamess

The program does not run and I obtain:

FATAL ERROR INITIALIZING FIREFLY! CHECK YOUR COMMAND LINE OPTIONS!

ON MASTER NODE, ERROR CODE IS : 0x00000004
   Unable to create output file

If I remove the "-o output.out" option, the program runs, but the end of the output file reads:

   2000000 WORDS OF MEMORY AVAILABLE

Warning: running without fastdiag runtime extension!

Warning: HTT is enabled, bitmask of physically unique cores is 0x0000FF00

SMT aware parts of program will use              2 threads.

Creating thread pool to serve up to            128 threads.

Activating Call64 option.

Using 64-bit DGEMM by default.
**** ERROR, NO $DATA GROUP WAS FOUND

CPU        TIME:   STEP =      0.90 ,  TOTAL =        1.3 SECONDS (    0.0 MIN)
WALL CLOCK TIME:   STEP =      0.89 ,  TOTAL =        0.9 SECONDS (    0.0 MIN)
CPU UTILIZATION:   STEP =    100.74%,  TOTAL =     145.51%

          0 WORDS OF    DYNAMIC MEMORY USED
EXECUTION OF FIREFLY TERMINATED ABNORMALLY AT 19:34:26 LT  20-JUN-2010





On Sun Jun 20 '10 8:04pm, Miro Moman wrote
------------------------------------------
>Hello,

>I am trying to run the MPICH2-Linux version of Firefly (firefly_71g_linux_mpich2_p4) in a local machine with two quad-core Nehalem processors. I have started the mpd daemon as per the MPICH website instructions.

>This is the command line I am using:

>/home/mirix/Downloads/firefly/firefly_71g_linux_mpich2_p4/firefly -i complex.inp -o output.out /disk/scratch/pcgamess /tmp/pcgamess -p4pg /home/mirix/Downloads/firefly/combo/procgrp

>The input file is the example from Combo (optimization of the final complex).

>As for the procgrp file I have tried:

>local 7 and aeolus 7 /home/mirix/Downloads/firefly/firefly_71g_linux_mpich2_p4/firefly

>Firefly correctly detects 8 cores and 16 threads but it only uses one processor.

>Best regards,

>Miro


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