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Re: PC GAMESS @ Lustre

Alex Granovsky
gran@classic.chem.msu.su


Dear Maryna,

could you please provide some more information:

1. What was the exact archive name (i.e., CPU type, MPI, and linking type) of the Firefly distribution you are using?

2. How much nodes was used and what was the exact command line string to launch Firefly?

3. The complete input as well as partial output would be very helpful.

Regards,
Alex Granovsky



On Wed Dec 16 '09 3:01pm, Maryna V. Krasovska wrote
---------------------------------------------------
>Dear Dr. Granovsky,

>I got the following error while trying to perform method 1 MP2 (either
>energy or gradient) using Lustre-1.8.1 file system for scratch files
>with  Firefly version 7.1.G, build number 5618.

>---------------------------------------------------
>I/O error is :: Interrupted system call

>TID 29821 caught signal 11, exiting.

>Dump of registers follows

>eax :: 0x00000000, edx :: 0x00000001
>ecx :: 0x64d2fec0, ebx :: 0x64cefe48
>esi :: 0x56e0f690, edi :: 0x00000011
>ebp :: 0xffcce050, esp :: 0xffcce000
>eip :: 0x104a850e, eflags :: 0x00210246

>cs  :: 0x0023
>ds  :: 0x002b
>es  :: 0x002b
>ss  :: 0x002b
>fs  :: 0x00d7
>gs  :: 0x0063

>Stack backtrace

>esp :: 0xffcce050, ebp :: 0x00000169, eip :: 0x11b0ee0c
>---------------------------------------------------

>dmesg:

>---------------------------------------------------
>firefly[31408]: segfault at 0000000000006ca1 rip 00000000555beaf5 rsp
>00000000ffce564c error 6
>firefly[32702]: segfault at 0000000000000004 rip 00000000003b9e33 rsp
>00000000ff9e2980 error 4
>firefly[32704]: segfault at 0000000000000004 rip 00000000003b9e33 rsp
>00000000ffc51b90 error 4
>firefly[32703]: segfault at 0000000000000004 rip 00000000003b9e33 rsp
>00000000ffa5f940 error 4
>firefly[328]: segfault at 0000000000000004 rip 00000000003b9e33 rsp
>00000000ffc4e950 error 4
>firefly[330]: segfault at 0000000000000004 rip 00000000003b9e33 rsp
>00000000fff8c950 error 4
>firefly[329]: segfault at 0000000000000004 rip 00000000003b9e33 rsp
>00000000ff8214c0 error 4
>---------------------------------------------------

>The output ends at shell #68 (of 180) of first half-transformation.
>No special I/O options were activates in input file.
>NFS works for scratch files on my cluster.
>Other programs works well with Lustre.

>Thanks for support!
>


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